Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystine abc transporter substrate-binding protein | D3880_RS00835 | Not Available | Negative | 178986 - 179786 | 29110.9 |
| d-cysteine desulfhydrase | D3880_RS00840 | Not Available | Negative | 179912 - 180922 | 35032.2 |
| class i sam-dependent methyltransferase | D3880_RS00845 | Not Available | Negative | 181128 - 181760 | 23311.7 |
| opt family oligopeptide transporter | D3880_RS00850 | Not Available | Negative | 181795 - 183792 | 68682.4 |
| oprd family porin | D3880_RS00855 | Not Available | Positive | 184216 - 185553 | 47509.9 |
| alpha-ketoglutarate permease | D3880_RS23235 | Not Available | Positive | 186333 - 186691 | 12884.5 |
| malate dehydrogenase | D3880_RS00865 | Not Available | Positive | 186762 - 187691 | 32774.8 |
| is256 family transposase | D3880_RS00870 | Not Available | Negative | 187914 - 189140 | 46602.1 |
| alpha-ketoglutarate permease | D3880_RS00875 | Not Available | Negative | 189433 - 190215 | 28519.6 |
| oxidoreductase c-terminal domain-containing protein | D3880_RS22975 | Not Available | Positive | 190318 - 190428 | 3820.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





