Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | D3880_RS07600 | Not Available | Positive | 1631178 - 1631603 | 15624.6 |
| 4-hydroxyphenylpyruvate dioxygenase | D3880_RS07605 | Not Available | Positive | 1631973 - 1633055 | 40080.3 |
| homogentisate 1,2-dioxygenase | D3880_RS07610 | Not Available | Positive | 1633251 - 1634384 | 42890.8 |
| fumarylacetoacetate hydrolase family protein | D3880_RS07615 | Not Available | Positive | 1634465 - 1635448 | 35608.3 |
| maleylacetoacetate isomerase | D3880_RS07620 | Not Available | Positive | 1635629 - 1636285 | 24184.2 |
| amino acid permease | D3880_RS07625 | Not Available | Positive | 1636379 - 1637794 | 51297.7 |
| hypothetical protein | D3880_RS23040 | Not Available | Negative | 1638037 - 1638333 | 10811.4 |
| sam-dependent methyltransferase | D3880_RS07635 | Not Available | Negative | 1638392 - 1640824 | 87479.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | D3880_RS07640 | Not Available | Negative | 1640827 - 1641570 | 26186.0 |
| type ii toxin-antitoxin system higb family toxin | D3880_RS07645 | Not Available | Positive | 1641890 - 1642174 | 11168.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





