Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannuronate-specific alginate lyase | D3880_RS05575 | Not Available | Negative | 1208680 - 1209783 | 41058.6 |
| alginate o-acetyltransferase | D3880_RS05580 | Not Available | Negative | 1209792 - 1211222 | 52816.6 |
| mannuronan 5-epimerase algg | D3880_RS05585 | Not Available | Negative | 1211234 - 1212784 | 57034.8 |
| alginate export family protein | D3880_RS05590 | Not Available | Negative | 1212991 - 1214433 | 53018.8 |
| alginate biosynthesis tpr repeat lipoprotein algk | D3880_RS05595 | Not Available | Negative | 1214430 - 1215836 | 50498.8 |
| alginate biosynthesis protein alg44 | D3880_RS05600 | Not Available | Negative | 1215850 - 1217016 | 41719.1 |
| mannuronan synthase | D3880_RS05605 | Not Available | Negative | 1217050 - 1218531 | 56463.4 |
| gdp-mannose 6-dehydrogenase | D3880_RS05610 | Not Available | Negative | 1218743 - 1220053 | 47250.9 |
| peroxide stress protein yaaa | D3880_RS05615 | Not Available | Negative | 1221038 - 1221817 | 29155.9 |
| long-chain-fatty-acid--coa ligase | D3880_RS05620 | Not Available | Positive | 1222066 - 1223622 | 56521.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





