Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernae |
| Strain | strain K2W31S-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
879277 bp
Thymine Count
876930 bp
Guanine Count
1593664 bp
Cytosine Count
1599744 bp
Genome Length
4949615 bp
Protein-coding Genes
4424 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication initiator trfa | D3880_RS04980 | Not Available | Positive | 1076864 - 1077595 | 28184.5 |
| hypothetical protein | D3880_RS22630 | Not Available | Negative | 1077863 - 1078576 | 27349.8 |
| type ii secretion system protein n | D3880_RS04990 | Not Available | Positive | 1079430 - 1080029 | 21713.8 |
| duf6531 domain-containing protein | D3880_RS04995 | Not Available | Positive | 1080148 - 1081794 | 59515.2 |
| rhs repeat-associated core domain-containing protein | D3880_RS05000 | Not Available | Positive | 1081812 - 1084622 | 100278.0 |
| tyrosine-type recombinase/integrase | D3880_RS05005 | Not Available | Negative | 1085422 - 1086417 | 37721.5 |
| mbl fold metallo-hydrolase | D3880_RS05010 | Not Available | Positive | 1086585 - 1087229 | 23459.1 |
| ompa family protein | D3880_RS05015 | Not Available | Positive | 1087315 - 1088001 | 23655.6 |
| acyltransferase | D3880_RS05020 | Not Available | Negative | 1088119 - 1089033 | 35657.3 |
| phosphate acetyltransferase | D3880_RS05025 | Not Available | Negative | 1089176 - 1091290 | 75252.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





