Vibrio neocaledonicus strain CGJ02-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio neocaledonicus strain CGJ02-2 is characterized by its possession of two replicons, which are essential for its genomic stability and function. The genomic information for this strain is cataloged under two specific accessions: NZ_CP032213.1 and NZ_CP032214.1. These accessions provide a basis for further genomic studies and comparative analysis with other Vibrio species. The presence of two replicons can indicate a complex genomic architecture, which may contribute to the strain's adaptability in various environments. This adaptability is significant for Vibrio species, as they are often found in marine ecosystems and can thrive under varying conditions. The genomic data associated with CGJ02-2 can help elucidate its ecological role, particularly in relation to its interactions within marine microbiomes. Understanding the genomic structure of Vibrio neocaledonicus strain CGJ02-2 not only adds to our knowledge of Vibrio diversity but also sheds light on the evolutionary mechanisms that allow this bacterium to survive in aquatic habitats. This information may provide insights into its potential applications in biotechnology or environmental monitoring, highlighting the importance of characterizing microbial strains within their ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio neocaledonicus
Strainstrain CGJ02-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio neocaledonicus strain CGJ02-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio neocaledonicus strain CGJ02-2 chromosome 1, complete

Gene Summary

Adenine Count

933642 bp

Thymine Count

944450 bp

Guanine Count

758892 bp

Cytosine Count

763299 bp

Genome Length

3400283 bp

Protein-coding Genes

3047 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase family 2 proteinD3H41_RS00985Not AvailableNegative203299 - 20406629820.4
glycosyltransferase family 9 proteinD3H41_RS00990Not AvailableNegative204102 - 20515738999.0
diacylglycerol kinaseD3H41_RS00995Not AvailablePositive205265 - 20567214527.1
3-deoxy-d-manno-octulosonic acid kinaseD3H41_RS01000Not AvailablePositive205684 - 20639427593.5
dtdp-glucose 4,6-dehydrataseD3H41_RS01005Not AvailablePositive206539 - 20760340032.8
glucose-1-phosphate thymidylyltransferase rfbaD3H41_RS01010Not AvailablePositive207603 - 20847532318.9
degt/dnrj/eryc1/strs family aminotransferaseD3H41_RS01015Not AvailablePositive208506 - 20959440176.1
amino acid adenylation domain-containing proteinD3H41_RS01020Not AvailablePositive209619 - 21115457569.2
phosphopantetheine-binding proteinD3H41_RS01025Not AvailablePositive211192 - 2113867042.42
ketoacyl-acp synthase iiiD3H41_RS01030Not AvailablePositive211390 - 21245739220.9

Displaying genes 271 – 280 of 4878 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.