Vibrio neocaledonicus strain CGJ02-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio neocaledonicus strain CGJ02-2 is characterized by its possession of two replicons, which are essential for its genomic stability and function. The genomic information for this strain is cataloged under two specific accessions: NZ_CP032213.1 and NZ_CP032214.1. These accessions provide a basis for further genomic studies and comparative analysis with other Vibrio species. The presence of two replicons can indicate a complex genomic architecture, which may contribute to the strain's adaptability in various environments. This adaptability is significant for Vibrio species, as they are often found in marine ecosystems and can thrive under varying conditions. The genomic data associated with CGJ02-2 can help elucidate its ecological role, particularly in relation to its interactions within marine microbiomes. Understanding the genomic structure of Vibrio neocaledonicus strain CGJ02-2 not only adds to our knowledge of Vibrio diversity but also sheds light on the evolutionary mechanisms that allow this bacterium to survive in aquatic habitats. This information may provide insights into its potential applications in biotechnology or environmental monitoring, highlighting the importance of characterizing microbial strains within their ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio neocaledonicus
Strainstrain CGJ02-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio neocaledonicus strain CGJ02-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio neocaledonicus strain CGJ02-2 chromosome 1, complete

Gene Summary

Adenine Count

933642 bp

Thymine Count

944450 bp

Guanine Count

758892 bp

Cytosine Count

763299 bp

Genome Length

3400283 bp

Protein-coding Genes

3047 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation elongation factor 4D3H41_RS13905Not AvailableNegative2819623 - 282141666029.5
soxr reducing system rsec family proteinD3H41_RS13910Not AvailableNegative2821575 - 282204516752.7
sigma-e factor regulatory protein rsebD3H41_RS13915Not AvailableNegative2822048 - 282300735986.3
sigma-e factor negative regulatory proteinD3H41_RS13920Not AvailableNegative2823004 - 282363022945.8
rna polymerase sigma factor rpoeD3H41_RS13925Not AvailableNegative2823657 - 282423521768.9
l-aspartate oxidaseD3H41_RS13935Not AvailablePositive2824790 - 282640360626.8
protein ygfxD3H41_RS13940Not AvailableNegative2826426 - 282688717109.6
succinate dehydrogenase assembly factor 2D3H41_RS13945Not AvailableNegative2826856 - 282711610034.1
pp_02635D3H41_RS13950Not AvailablePositive2827306 - 2828274Not Available
aminoacyl-trna deacylaseD3H41_RS13955Not AvailablePositive2828267 - 282874017522.6

Displaying genes 2701 – 2710 of 4878 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.