Vibrio neocaledonicus strain CGJ02-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio neocaledonicus strain CGJ02-2 is characterized by its possession of two replicons, which are essential for its genomic stability and function. The genomic information for this strain is cataloged under two specific accessions: NZ_CP032213.1 and NZ_CP032214.1. These accessions provide a basis for further genomic studies and comparative analysis with other Vibrio species. The presence of two replicons can indicate a complex genomic architecture, which may contribute to the strain's adaptability in various environments. This adaptability is significant for Vibrio species, as they are often found in marine ecosystems and can thrive under varying conditions. The genomic data associated with CGJ02-2 can help elucidate its ecological role, particularly in relation to its interactions within marine microbiomes. Understanding the genomic structure of Vibrio neocaledonicus strain CGJ02-2 not only adds to our knowledge of Vibrio diversity but also sheds light on the evolutionary mechanisms that allow this bacterium to survive in aquatic habitats. This information may provide insights into its potential applications in biotechnology or environmental monitoring, highlighting the importance of characterizing microbial strains within their ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio neocaledonicus
Strainstrain CGJ02-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio neocaledonicus strain CGJ02-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio neocaledonicus strain CGJ02-2 chromosome 1, complete

Gene Summary

Adenine Count

933642 bp

Thymine Count

944450 bp

Guanine Count

758892 bp

Cytosine Count

763299 bp

Genome Length

3400283 bp

Protein-coding Genes

3047 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s ribosomal rnaNot AvailableNot AvailablePositive28210 - 31100Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive31194 - 31310Not Available
hth-type transcriptional activator ilvyD3H41_RS00145Not AvailableNegative31402 - 3229232908.1
ketol-acid reductoisomeraseD3H41_RS00150Not AvailablePositive32436 - 3392054610.2
ubiquinone biosynthesis accessory factor ubikD3H41_RS00155Not AvailableNegative34199 - 344509701.78
multidrug efflux rnd transporter permease subunit vmedD3H41_RS00160Not AvailableNegative34582 - 37704112105.0
efflux rnd transporter periplasmic adaptor subunitD3H41_RS00165Not AvailableNegative37717 - 3882040378.5
tetr/acrr family transcriptional regulatorD3H41_RS00170Not AvailableNegative38839 - 3942021592.8
dna helicase repD3H41_RS00175Not AvailablePositive39591 - 4160677278.5
c-type cytochromeD3H41_RS00180Not AvailableNegative41680 - 4209314439.0

Displaying genes 111 – 120 of 4878 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.