Escherichia coli strain AR_0086

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain AR_0086 is a Gram-negative, rod-shaped bacterium that exhibits mobility through the presence of flagella. It is classified as a facultative anaerobe, capable of thriving in both aerobic and anaerobic environments, with an optimal growth temperature of 37°C, which places it within the mesophilic range. This strain is host-associated and demonstrates a free-living biotic relationship, allowing it to inhabit a diverse range of hosts including Homo sapiens, various domesticated animals like Gallus gallus (chickens) and Bos taurus (cattle), as well as plants such as Solanum lycopersicum (tomatoes). The pathogenicity of E. coli strain AR_0086 is notable, particularly in human health, as it is associated with various serious health effects. These include urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis, among others. It can lead to conditions such as hemolytic uremic syndrome (HUS), diarrhea, and even complications like sepsis and colibacillosis. The strain’s ability to inhabit multiple hosts suggests a significant ecological versatility, which may contribute to its role as a pathogen in both human and animal populations. The presence of diverse pathogenic effects underscores the importance of monitoring E. coli strain AR_0086 in clinical and environmental contexts, highlighting its potential impact on health and disease transmission across species. This strain exemplifies the complex interactions between microbial pathogens and their hosts, illustrating the need for continued research and surveillance to mitigate the public health risks associated with it.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain AR_0086

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain AR_0086
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain AR_0086


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

158 genes

Non-Coding Genes

21 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv conjugative transfer system protein tralAM465_RS28150Not AvailablePositive53889 - 540024322.42
type iv conjugative transfer system protein tralAM465_RS26845Not AvailablePositive54140 - 543105948.16
protein disulfide oxidoreductaseAM465_RS26850Not AvailablePositive54300 - 5480618906.0
na(+)-translocating nadh-quinone reductase subunit cAM465_RS26855Not AvailablePositive55043 - 5580428433.2
ftr1 family proteinAM465_RS26865Not AvailablePositive56151 - 5803770160.5
iron transporterAM465_RS26870Not AvailablePositive58078 - 5860519225.1
fe-s-containing proteinAM465_RS26875Not AvailablePositive58709 - 6008851008.0
abc transporter permeaseAM465_RS26880Not AvailablePositive60091 - 6137446201.3
abc transporter permeaseAM465_RS26885Not AvailablePositive61364 - 6249440970.7
abc transporter atp-binding proteinAM465_RS26890Not AvailablePositive62499 - 6319425575.7

Displaying genes 71 – 80 of 179 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total