Malaciobacter marinus strain JCM 15502

rod

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Malaciobacter

Description

Malaciobacter marinus strain JCM 15502 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is indicative of its genomic structure. The genomic information for this strain can be referenced under the accession number NZ_CP032101.1. The Gram-negative classification of Malaciobacter marinus indicates that it has a thin peptidoglycan layer surrounded by an outer membrane, which typically contains lipopolysaccharides. This structural feature can influence its interaction with the environment and its susceptibility to various antimicrobial agents. As a member of the genus Malaciobacter, this strain is likely adapted to specific ecological niches, potentially including marine environments, given its species designation "marinus," which suggests a relationship with marine ecosystems. The understanding of such organisms contributes to the broader knowledge of microbial diversity and ecological functions in aquatic habitats. In summary, Malaciobacter marinus strain JCM 15502, with its distinct Gram-negative rod morphology and single replicon, highlights the complexity of microbial life in marine environments and the importance of studying such organisms to uncover their roles in ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusMalaciobacter
SpeciesMalaciobacter marinus
Strainstrain JCM 15502

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcheese rind; East Sea; Sea of Japan
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malaciobacter marinus strain JCM 15502 chromosome, complete

Gene Summary

Adenine Count

1059406 bp

Thymine Count

1064634 bp

Guanine Count

390293 bp

Cytosine Count

402765 bp

Genome Length

2917098 bp

Protein-coding Genes

2764 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter substrate-binding proteinAMRN_RS05090Not AvailablePositive1027203 - 102815935514.6
trap transporter small permease subunitAMRN_RS05095Not AvailablePositive1028232 - 102865115737.5
trap transporter large permeaseAMRN_RS05100Not AvailablePositive1028641 - 102997847875.9
5-oxoprolinase subunit pxpaAMRN_RS05105Not AvailablePositive1030014 - 103074827516.4
5-oxoprolinase subunit pxpbAMRN_RS05110Not AvailablePositive1030750 - 103142425034.3
biotin-dependent carboxyltransferase family proteinAMRN_RS05115Not AvailablePositive1031421 - 103233234232.2
diguanylate cyclaseAMRN_RS05120Not AvailableNegative1032351 - 103314531323.4
eal domain-containing proteinAMRN_RS05125Not AvailableNegative1033129 - 103428645148.9
deda family proteinAMRN_RS05130Not AvailablePositive1034544 - 103507419760.8
lyse family translocatorAMRN_RS05135Not AvailablePositive1035071 - 103568222498.3

Displaying genes 1031 – 1040 of 2846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.