Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit a | D0Z68_RS05205 | Not Available | Positive | 862712 - 863410 | 25602.3 |
| 3-oxoacid coa-transferase subunit b | D0Z68_RS05210 | Not Available | Positive | 863414 - 864049 | 23061.9 |
| flavodoxin family protein | D0Z68_RS09065 | Not Available | Positive | 864063 - 864179 | 4162.95 |
| flavodoxin family protein | D0Z68_RS09070 | Not Available | Positive | 864157 - 864438 | 10482.4 |
| hypothetical protein | D0Z68_RS09075 | Not Available | Positive | 864416 - 864637 | 8216.76 |
| hypothetical protein | D0Z68_RS05220 | Not Available | Negative | 864793 - 866442 | 62143.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | D0Z68_RS05225 | Not Available | Negative | 866563 - 867648 | 39704.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | D0Z68_RS05230 | Not Available | Negative | 867843 - 869192 | 50311.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | D0Z68_RS05240 | Not Available | Negative | 869401 - 870840 | 53651.6 |
| transcription-repair coupling factor | D0Z68_RS05250 | Not Available | Negative | 870987 - 874352 | 127371.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

