Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s18 | D0Z68_RS00415 | Not Available | Positive | 61682 - 61969 | 10626.3 |
| 50s ribosomal protein l9 | D0Z68_RS00420 | Not Available | Positive | 61981 - 62496 | 19322.2 |
| trna lysidine(34) synthetase tils | D0Z68_RS00430 | Not Available | Positive | 62802 - 64409 | 61890.6 |
| atp-dependent zinc metalloprotease ftsh | D0Z68_RS00435 | Not Available | Positive | 64515 - 66428 | 69919.2 |
| tetratricopeptide repeat protein | D0Z68_RS08520 | Not Available | Positive | 66446 - 66936 | 18458.8 |
| site-specific dna methylase | D0Z68_RS00450 | Not Available | Positive | 66878 - 67180 | 12067.7 |
| succinate dehydrogenase iron-sulfur subunit | D0Z68_RS00460 | Not Available | Positive | 67830 - 68615 | 29677.8 |
| tetratricopeptide repeat protein | D0Z68_RS09405 | Not Available | Positive | 68689 - 68992 | 11796.5 |
| class i sam-dependent methyltransferase | D0Z68_RS00470 | Not Available | Negative | 69166 - 70386 | 46779.8 |
| prolipoprotein diacylglyceryl transferase | D0Z68_RS00475 | Not Available | Negative | 70365 - 71144 | 29062.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

