Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrf2 family transcriptional regulator | D0Z68_RS04690 | Not Available | Positive | 782535 - 782963 | 16058.6 |
| tlya family rna methyltransferase | D0Z68_RS04695 | Not Available | Negative | 782958 - 783713 | 28285.1 |
| tyrosine--trna ligase | D0Z68_RS04700 | Not Available | Negative | 783872 - 785107 | 46674.1 |
| tetratricopeptide repeat protein | D0Z68_RS04705 | Not Available | Negative | 785111 - 785391 | 11252.3 |
| copg family antitoxin | D0Z68_RS04710 | Not Available | Negative | 785397 - 785648 | 9733.66 |
| hypothetical protein | D0Z68_RS04715 | Not Available | Positive | 785717 - 786028 | 11061.2 |
| hypothetical protein | D0Z68_RS09000 | Not Available | Negative | 786429 - 786743 | 11856.1 |
| hypothetical protein | D0Z68_RS09005 | Not Available | Negative | 786808 - 787086 | 10250.5 |
| Trna-arg | Not Available | Not Available | Positive | 787288 - 787364 | Not Available |
| transposase | D0Z68_RS04735 | Not Available | Positive | 787387 - 787602 | 7727.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

