Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | D0Z68_RS04470 | Not Available | Positive | 746354 - 746533 | 6638.78 |
| hypothetical protein | D0Z68_RS08060 | Not Available | Negative | 746860 - 747009 | 6064.15 |
| iron-sulfur cluster assembly accessory protein | D0Z68_RS04480 | Not Available | Negative | 747039 - 747371 | 12201.7 |
| fe-s cluster assembly scaffold iscu | D0Z68_RS04485 | Not Available | Negative | 747375 - 747770 | 14012.7 |
| iscs subfamily cysteine desulfurase | D0Z68_RS04495 | Not Available | Negative | 747922 - 749154 | 45565.4 |
| cysteine desulfurase family protein | D0Z68_RS04500 | Not Available | Negative | 749257 - 750375 | 40343.4 |
| fe-s cluster assembly transcription factor | D0Z68_RS04505 | Not Available | Negative | 750372 - 750791 | 15633.2 |
| tetratricopeptide repeat protein | D0Z68_RS09580 | Not Available | Negative | 751254 - 751492 | 9129.37 |
| hypothetical protein | D0Z68_RS04520 | Not Available | Negative | 751477 - 752697 | 46258.7 |
| duf1189 family protein | D0Z68_RS04525 | Not Available | Negative | 752834 - 753706 | 33673.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

