Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0Z68_RS08050 | Not Available | Negative | 728739 - 728867 | 4843.93 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | D0Z68_RS08055 | Not Available | Negative | 728891 - 729004 | 4235.31 |
| alpha/beta hydrolase | D0Z68_RS04380 | Not Available | Positive | 729262 - 729981 | 26875.0 |
| tetratricopeptide repeat protein | D0Z68_RS04385 | Not Available | Negative | 730216 - 731220 | 39413.2 |
| palindromic element rpe2 domain-containing protein | D0Z68_RS04390 | Not Available | Negative | 731213 - 731965 | 29046.0 |
| uroporphyrinogen-iii synthase | D0Z68_RS04395 | Not Available | Negative | 731949 - 732623 | 26010.7 |
| lyse/argo family amino acid transporter | D0Z68_RS04400 | Not Available | Negative | 732601 - 733242 | 23415.7 |
| ampg family muropeptide mfs transporter | D0Z68_RS04410 | Not Available | Negative | 733837 - 735090 | 46848.1 |
| tetratricopeptide repeat protein | D0Z68_RS09555 | Not Available | Negative | 735296 - 735542 | 9643.6 |
| transposase | D0Z68_RS09560 | Not Available | Negative | 735539 - 735688 | 5852.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

