Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | D0Z68_RS00355 | Not Available | Negative | 52134 - 52394 | 9734.73 |
| hypothetical protein | D0Z68_RS07820 | Not Available | Negative | 52394 - 52543 | 5656.09 |
| hypothetical protein | D0Z68_RS07825 | Not Available | Negative | 52749 - 53330 | 21913.4 |
| hypothetical protein | D0Z68_RS08515 | Not Available | Negative | 53641 - 54234 | 22525.1 |
| atp-dependent chaperone clpb | D0Z68_RS00385 | Not Available | Positive | 54520 - 57093 | 95812.8 |
| duf5424 family protein | D0Z68_RS00390 | Not Available | Negative | 57315 - 57806 | 18279.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | D0Z68_RS00395 | Not Available | Negative | 57909 - 58967 | 38307.5 |
| fatty acid desaturase | D0Z68_RS00400 | Not Available | Negative | 59151 - 60341 | 46040.3 |
| winged helix-turn-helix domain-containing protein | D0Z68_RS00405 | Not Available | Negative | 60474 - 60800 | 12943.8 |
| 30s ribosomal protein s6 | D0Z68_RS00410 | Not Available | Positive | 61292 - 61657 | 13871.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

