Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | D0Z68_RS08915 | Not Available | Positive | 694141 - 694428 | 11132.2 |
| hypothetical protein | D0Z68_RS08920 | Not Available | Positive | 694501 - 694719 | 8336.25 |
| hypothetical protein | D0Z68_RS08925 | Not Available | Positive | 694759 - 695676 | 34847.6 |
| Trna-val | Not Available | Not Available | Positive | 695789 - 695865 | Not Available |
| hypothetical protein | D0Z68_RS09840 | Not Available | Positive | 695993 - 696061 | 2500.22 |
| helix-turn-helix transcriptional regulator | D0Z68_RS04150 | Not Available | Positive | 696150 - 696353 | 7417.1 |
| (d)cmp kinase | D0Z68_RS04155 | Not Available | Positive | 696476 - 697135 | 24501.9 |
| 30s ribosomal protein s1 | D0Z68_RS04160 | Not Available | Positive | 697404 - 699110 | 63677.1 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | D0Z68_RS04165 | Not Available | Positive | 699267 - 699872 | 22635.7 |
| Trna-ala | Not Available | Not Available | Positive | 700035 - 700110 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

