Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | D0Z68_RS04090 | Not Available | Positive | 685688 - 687451 | 65047.4 |
| class i sam-dependent methyltransferase | D0Z68_RS04095 | Not Available | Positive | 687494 - 688816 | 50820.9 |
| transcription termination factor rho | D0Z68_RS04100 | Not Available | Positive | 689201 - 690577 | 51264.9 |
| signal peptide peptidase sppa | D0Z68_RS04105 | Not Available | Positive | 690705 - 691619 | 33849.7 |
| hu family dna-binding protein | D0Z68_RS04110 | Not Available | Positive | 691622 - 691864 | 9841.93 |
| hypothetical protein | D0Z68_RS04115 | Not Available | Positive | 691878 - 692078 | 7657.32 |
| hypothetical protein | D0Z68_RS04125 | Not Available | Positive | 692441 - 692632 | 6801.25 |
| yaaa family protein | D0Z68_RS04130 | Not Available | Positive | 692635 - 693381 | 28178.1 |
| hypothetical protein | D0Z68_RS08905 | Not Available | Negative | 693493 - 693705 | 7823.46 |
| hypothetical protein | D0Z68_RS08910 | Not Available | Positive | 693719 - 694174 | 17568.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

