Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0Z68_RS09510 | Not Available | Negative | 648095 - 648385 | 10102.8 |
| phosphomannomutase/phosphoglucomutase | D0Z68_RS03875 | Not Available | Negative | 648463 - 649851 | 51344.0 |
| lps export abc transporter atp-binding protein | D0Z68_RS03880 | Not Available | Negative | 650014 - 650736 | 26836.8 |
| lpta/osta family protein | D0Z68_RS03885 | Not Available | Negative | 650919 - 651335 | 15972.9 |
| lps export abc transporter periplasmic protein lptc | D0Z68_RS03890 | Not Available | Negative | 651471 - 652067 | 22866.4 |
| sis domain-containing protein | D0Z68_RS03895 | Not Available | Negative | 652073 - 653032 | 35260.2 |
| polyribonucleotide nucleotidyltransferase | D0Z68_RS03900 | Not Available | Negative | 653232 - 655478 | 82212.2 |
| 30s ribosomal protein s15 | D0Z68_RS03905 | Not Available | Negative | 655626 - 655901 | 10595.0 |
| trna pseudouridine(55) synthase trub | D0Z68_RS03910 | Not Available | Negative | 655937 - 656974 | 38816.9 |
| ntp/ndp exchange transporter tlc4 | D0Z68_RS03915 | Not Available | Positive | 657059 - 658594 | 57959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

