Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spore coat u domain-containing protein | D0Z68_RS03810 | Not Available | Positive | 636443 - 636940 | 17745.2 |
| tetratricopeptide repeat protein | D0Z68_RS09825 | Not Available | Positive | 637087 - 637444 | 13243.9 |
| ribonucleoside-diphosphate reductase subunit alpha | D0Z68_RS03825 | Not Available | Positive | 638122 - 639945 | 68420.6 |
| pd-(d/e)xk nuclease family transposase | D0Z68_RS07990 | Not Available | Positive | 640051 - 640359 | 12059.6 |
| pd-(d/e)xk nuclease family transposase | D0Z68_RS07995 | Not Available | Positive | 640244 - 640564 | 12075.4 |
| hypothetical protein | D0Z68_RS08000 | Not Available | Positive | 640620 - 640832 | 8105.62 |
| ribonucleotide-diphosphate reductase subunit beta | D0Z68_RS03835 | Not Available | Positive | 640819 - 641802 | 38097.6 |
| pentapeptide repeat-containing protein | D0Z68_RS03845 | Not Available | Positive | 641990 - 644839 | 107986.0 |
| tetratricopeptide repeat protein | D0Z68_RS08880 | Not Available | Positive | 644983 - 646632 | 59203.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | D0Z68_RS03865 | Not Available | Negative | 646804 - 647895 | 41650.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

