Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | D0Z68_RS03505 | Not Available | Positive | 592240 - 592698 | 17995.0 |
| dsba family protein | D0Z68_RS03510 | Not Available | Positive | 592830 - 593630 | 30258.8 |
| succinate--coa ligase subunit alpha | D0Z68_RS03515 | Not Available | Negative | 593853 - 594731 | 30177.8 |
| adp-forming succinate--coa ligase subunit beta | D0Z68_RS03525 | Not Available | Negative | 594907 - 596067 | 41938.6 |
| tetratricopeptide repeat protein | D0Z68_RS03530 | Not Available | Negative | 596100 - 596476 | 14090.6 |
| abrb/maze/spovt family dna-binding domain-containing protein | D0Z68_RS03535 | Not Available | Negative | 596463 - 596717 | 9388.43 |
| cytochrome b | D0Z68_RS03545 | Not Available | Negative | 597055 - 597333 | 10714.6 |
| s9 family peptidase | D0Z68_RS03550 | Not Available | Negative | 597498 - 599534 | 76661.4 |
| tim44 domain-containing protein | D0Z68_RS03555 | Not Available | Negative | 599622 - 600257 | 24552.4 |
| hypothetical protein | D0Z68_RS03560 | Not Available | Negative | 600585 - 600962 | 14348.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

