Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | D0Z68_RS03410 | Not Available | Positive | 573930 - 574742 | 30060.1 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | D0Z68_RS03415 | Not Available | Positive | 574717 - 575982 | 47649.0 |
| phenylalanine--trna ligase subunit alpha | D0Z68_RS03420 | Not Available | Positive | 576224 - 577273 | 40479.8 |
| phenylalanine--trna ligase subunit beta | D0Z68_RS03425 | Not Available | Positive | 577270 - 579726 | 90791.2 |
| dna polymerase iii subunit beta | D0Z68_RS03430 | Not Available | Positive | 579731 - 580870 | 42322.0 |
| duf1653 domain-containing protein | D0Z68_RS08840 | Not Available | Positive | 580960 - 581064 | 4137.16 |
| duf3576 domain-containing protein | D0Z68_RS03440 | Not Available | Positive | 581225 - 581728 | 18767.6 |
| leucine--trna ligase | D0Z68_RS03445 | Not Available | Positive | 581857 - 584364 | 96651.6 |
| tetratricopeptide repeat protein | D0Z68_RS08845 | Not Available | Negative | 584361 - 584457 | 3590.24 |
| hypothetical protein | D0Z68_RS07960 | Not Available | Negative | 584645 - 584785 | 5353.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

