Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | D0Z68_RS03300 | Not Available | Positive | 560400 - 561896 | 55732.4 |
| putative lipid ii flippase ftsw | D0Z68_RS03310 | Not Available | Positive | 562028 - 563161 | 41628.1 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | D0Z68_RS03315 | Not Available | Positive | 563158 - 564309 | 42918.1 |
| tetratricopeptide repeat protein | D0Z68_RS03320 | Not Available | Negative | 564492 - 564650 | 5962.9 |
| hypothetical protein | D0Z68_RS03325 | Not Available | Positive | 564662 - 565315 | 25096.7 |
| hypothetical protein | D0Z68_RS07955 | Not Available | Positive | 565897 - 566073 | 6505.43 |
| tetratricopeptide repeat protein | D0Z68_RS09960 | Not Available | Negative | 566110 - 566211 | 3830.55 |
| hypothetical protein | D0Z68_RS03335 | Not Available | Negative | 566211 - 566420 | 7699.64 |
| efflux rnd transporter permease subunit | D0Z68_RS03340 | Not Available | Negative | 566494 - 567201 | 25451.3 |
| efflux rnd transporter permease subunit | D0Z68_RS03345 | Not Available | Negative | 567242 - 567676 | 16357.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

