Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pd-(d/e)xk nuclease family protein | D0Z68_RS03235 | Not Available | Negative | 549700 - 552216 | 97644.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | D0Z68_RS03245 | Not Available | Negative | 552769 - 553497 | 27228.8 |
| cytochrome c oxidase subunit i | D0Z68_RS03250 | Not Available | Negative | 553703 - 555301 | 58938.9 |
| tetratricopeptide repeat protein | D0Z68_RS03255 | Not Available | Negative | 555307 - 555698 | 15128.5 |
| cytochrome c oxidase subunit ii | D0Z68_RS03260 | Not Available | Negative | 555889 - 556836 | 35652.6 |
| adenylyltransferase/cytidyltransferase family protein | D0Z68_RS03265 | Not Available | Negative | 557007 - 557426 | 16111.8 |
| m23 family metallopeptidase | D0Z68_RS03270 | Not Available | Positive | 557666 - 559030 | 50361.7 |
| signal peptidase ii | D0Z68_RS03275 | Not Available | Positive | 559221 - 559829 | 23417.7 |
| tetratricopeptide repeat protein | D0Z68_RS09785 | Not Available | Positive | 559833 - 559948 | 4174.0 |
| duf3035 domain-containing protein | D0Z68_RS03285 | Not Available | Positive | 559982 - 560230 | 9156.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

