Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftr1 family protein | D0Z68_RS03175 | Not Available | Negative | 539637 - 540485 | 31174.2 |
| cupredoxin domain-containing protein | D0Z68_RS03180 | Not Available | Negative | 540495 - 540875 | 14511.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D0Z68_RS03185 | Not Available | Negative | 541066 - 542061 | 36801.7 |
| dioxygenase | D0Z68_RS03190 | Not Available | Positive | 542200 - 542826 | 24076.0 |
| tlpa disulfide reductase family protein | D0Z68_RS03195 | Not Available | Positive | 543034 - 543678 | 24943.4 |
| s49 family peptidase | D0Z68_RS03200 | Not Available | Positive | 543843 - 544757 | 33980.4 |
| dutp diphosphatase | D0Z68_RS03205 | Not Available | Positive | 544759 - 545205 | 15957.4 |
| lytic transglycosylase domain-containing protein | D0Z68_RS03210 | Not Available | Positive | 545319 - 547280 | 75768.4 |
| hypothetical protein | D0Z68_RS03215 | Not Available | Positive | 547366 - 548331 | 36517.3 |
| ld-carboxypeptidase | D0Z68_RS03225 | Not Available | Positive | 548542 - 549489 | 34943.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

