Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-manno-octulosonate cytidylyltransferase | D0Z68_RS03075 | Not Available | Negative | 522980 - 523720 | 27505.3 |
| Trna-lys | Not Available | Not Available | Positive | 523828 - 523903 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 523918 - 523994 | Not Available |
| hypothetical protein | D0Z68_RS03090 | Not Available | Positive | 524101 - 524391 | 11437.0 |
| nucleotide triphosphate diphosphatase nudt15 | D0Z68_RS03095 | Not Available | Negative | 524484 - 524756 | 10318.3 |
| cbb3-type cytochrome c oxidase subunit i | D0Z68_RS03100 | Not Available | Positive | 524936 - 526522 | 60138.3 |
| gtp cyclohydrolase i fole | D0Z68_RS03105 | Not Available | Positive | 526515 - 527084 | 21485.1 |
| proline--trna ligase | D0Z68_RS03110 | Not Available | Positive | 527250 - 528530 | 48432.5 |
| fic family protein | D0Z68_RS03115 | Not Available | Positive | 528743 - 529711 | 37031.9 |
| hypothetical protein | D0Z68_RS03120 | Not Available | Positive | 529905 - 530111 | 7881.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

