Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit c | D0Z68_RS02860 | Not Available | Negative | 487843 - 488571 | 27953.4 |
| nuob/complex i 20 kda subunit family protein | D0Z68_RS02865 | Not Available | Negative | 488549 - 489073 | 19616.8 |
| nadh-quinone oxidoreductase subunit a | D0Z68_RS02870 | Not Available | Negative | 489078 - 489449 | 14326.0 |
| o-antigen ligase family protein | D0Z68_RS02875 | Not Available | Negative | 489607 - 490842 | 46706.6 |
| duf2155 domain-containing protein | D0Z68_RS02880 | Not Available | Negative | 490843 - 491316 | 18197.7 |
| hypothetical protein | D0Z68_RS08770 | Not Available | Positive | 491903 - 492265 | 13812.6 |
| hypothetical protein | D0Z68_RS08775 | Not Available | Positive | 492240 - 492671 | 16805.1 |
| Trna-cys | Not Available | Not Available | Positive | 493045 - 493119 | Not Available |
| site-specific tyrosine recombinase xerd | D0Z68_RS02900 | Not Available | Positive | 493141 - 494061 | 34654.2 |
| duf5410 family protein | D0Z68_RS02905 | Not Available | Positive | 494145 - 495164 | 39147.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

