Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D0Z68_RS08750 | Not Available | Negative | 470881 - 471147 | 10131.3 |
| hypothetical protein | D0Z68_RS08755 | Not Available | Negative | 471754 - 472089 | 12765.4 |
| hypothetical protein | D0Z68_RS02760 | Not Available | Negative | 472346 - 472972 | 23465.2 |
| 30s ribosomal protein s4 | D0Z68_RS02765 | Not Available | Negative | 473270 - 473887 | 23137.1 |
| heme o synthase | D0Z68_RS02770 | Not Available | Positive | 474012 - 474929 | 34340.1 |
| spl family radical sam protein | D0Z68_RS02775 | Not Available | Negative | 475213 - 475965 | 29254.1 |
| duf4385 family protein | D0Z68_RS02780 | Not Available | Positive | 476081 - 476296 | 8335.83 |
| hypothetical protein | D0Z68_RS02790 | Not Available | Positive | 476449 - 476808 | 13597.3 |
| asma family protein | D0Z68_RS02795 | Not Available | Negative | 476950 - 479442 | 90770.3 |
| ribosome maturation factor rimm | D0Z68_RS02800 | Not Available | Negative | 479750 - 480247 | 18706.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

