Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | D0Z68_RS02695 | Not Available | Positive | 460738 - 461763 | 38483.5 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | D0Z68_RS02700 | Not Available | Positive | 461756 - 462889 | 43437.7 |
| hypothetical protein | D0Z68_RS02705 | Not Available | Positive | 462849 - 464195 | 52545.9 |
| class i sam-dependent methyltransferase | D0Z68_RS02710 | Not Available | Positive | 464211 - 464690 | 18099.0 |
| hypothetical protein | D0Z68_RS07940 | Not Available | Positive | 464937 - 465095 | 6242.87 |
| glycosyltransferase family 2 protein | D0Z68_RS02715 | Not Available | Positive | 465128 - 466942 | 69002.3 |
| efflux rnd transporter periplasmic adaptor subunit | D0Z68_RS02720 | Not Available | Negative | 466947 - 467945 | 36533.1 |
| duf2608 domain-containing protein | D0Z68_RS02725 | Not Available | Negative | 468036 - 468830 | 30725.1 |
| alpha/beta hydrolase | D0Z68_RS02730 | Not Available | Negative | 468840 - 469607 | 29070.6 |
| glycosyltransferase family 4 protein | D0Z68_RS02735 | Not Available | Positive | 469640 - 470812 | 43980.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

