Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2628 domain-containing protein | D0Z68_RS02530 | Not Available | Negative | 438090 - 438443 | 13665.1 |
| palindromic element rpe5 domain-containing protein | D0Z68_RS02535 | Not Available | Negative | 438514 - 438615 | 3854.48 |
| atp-dependent protease subunit hslv | D0Z68_RS02540 | Not Available | Positive | 438697 - 439245 | 19749.1 |
| atp-dependent protease atpase subunit hslu | D0Z68_RS02545 | Not Available | Positive | 439242 - 440594 | 49568.3 |
| magnesium chelatase domain-containing protein | D0Z68_RS08730 | Not Available | Positive | 440840 - 441037 | 6876.55 |
| tetratricopeptide repeat protein | D0Z68_RS08735 | Not Available | Positive | 441335 - 441965 | 22507.4 |
| pd-(d/e)xk nuclease family transposase | D0Z68_RS02575 | Not Available | Positive | 441952 - 442218 | 9827.67 |
| tetratricopeptide repeat protein | D0Z68_RS09465 | Not Available | Positive | 442309 - 442895 | 21851.9 |
| lipid-a-disaccharide synthase | D0Z68_RS02590 | Not Available | Positive | 442905 - 444245 | 50686.2 |
| hypothetical protein | D0Z68_RS02595 | Not Available | Negative | 444242 - 444514 | 10805.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

