Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein hydrolase activator envc family protein | D0Z68_RS02370 | Not Available | Positive | 411372 - 412010 | 23597.2 |
| m48 family metallopeptidase | D0Z68_RS02375 | Not Available | Positive | 412011 - 412703 | 26767.9 |
| fad-dependent thymidylate synthase | D0Z68_RS02380 | Not Available | Positive | 412854 - 413738 | 34405.3 |
| tol-pal system beta propeller repeat protein tolb | D0Z68_RS02385 | Not Available | Positive | 413813 - 415147 | 49288.9 |
| rna polymerase sigma factor rpoh | D0Z68_RS02390 | Not Available | Negative | 415285 - 416166 | 33089.9 |
| cytochrome c oxidase assembly protein | D0Z68_RS02395 | Not Available | Positive | 416265 - 416831 | 21372.0 |
| hypothetical protein | D0Z68_RS02400 | Not Available | Negative | 416929 - 417909 | 37990.8 |
| trna 2-thiouridine(34) synthase mnma | D0Z68_RS02405 | Not Available | Positive | 418172 - 419269 | 40183.3 |
| amino acid permease | D0Z68_RS02410 | Not Available | Positive | 419398 - 420795 | 49876.4 |
| histidine--trna ligase | D0Z68_RS02415 | Not Available | Positive | 420945 - 422189 | 47418.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

