Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer family protein | D0Z68_RS02310 | Not Available | Positive | 399436 - 401211 | 66944.6 |
| ppx/gppa phosphatase family protein | D0Z68_RS02315 | Not Available | Positive | 401213 - 402625 | 53657.6 |
| hypothetical protein | D0Z68_RS08725 | Not Available | Negative | 402707 - 403339 | 24418.3 |
| hypothetical protein | D0Z68_RS09455 | Not Available | Positive | 404662 - 404925 | 9866.21 |
| hypothetical protein | D0Z68_RS02335 | Not Available | Negative | 404867 - 405154 | 10580.7 |
| duf2608 domain-containing protein | D0Z68_RS02340 | Not Available | Positive | 405396 - 406280 | 34215.3 |
| duf2608 domain-containing protein | D0Z68_RS02345 | Not Available | Positive | 406243 - 407088 | 32105.4 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | D0Z68_RS02350 | Not Available | Positive | 407091 - 407867 | 28783.4 |
| dna mismatch repair protein muts | D0Z68_RS02360 | Not Available | Negative | 408007 - 410667 | 99968.9 |
| ribose 5-phosphate isomerase b | D0Z68_RS02365 | Not Available | Negative | 410850 - 411284 | 15895.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

