Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | D0Z68_RS01925 | Not Available | Positive | 335777 - 336829 | 39058.3 |
| hypothetical protein | D0Z68_RS09430 | Not Available | Positive | 336942 - 337127 | 7201.92 |
| rpn family recombination-promoting nuclease/putative transposase | D0Z68_RS08690 | Not Available | Positive | 337165 - 337404 | 9493.66 |
| hypothetical protein | D0Z68_RS01940 | Not Available | Negative | 337785 - 337988 | 7421.2 |
| bola family protein | D0Z68_RS01945 | Not Available | Negative | 337985 - 338227 | 9197.06 |
| eal domain-containing protein | D0Z68_RS01950 | Not Available | Positive | 338282 - 339505 | 47211.2 |
| udp-n-acetylmuramate--l-alanine ligase | D0Z68_RS01955 | Not Available | Positive | 339726 - 341183 | 53253.1 |
| udp-n-acetylmuramate dehydrogenase | D0Z68_RS01965 | Not Available | Positive | 341404 - 342291 | 32712.3 |
| d-alanine--d-alanine ligase | D0Z68_RS01970 | Not Available | Positive | 342429 - 343394 | 35934.4 |
| cell division protein ftsq/divib | D0Z68_RS01975 | Not Available | Positive | 343391 - 344194 | 31103.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

