Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | D0Z68_RS01825 | Not Available | Positive | 322276 - 323769 | 56697.9 |
| tol-pal system protein ybgf | D0Z68_RS01830 | Not Available | Positive | 323836 - 324573 | 27928.6 |
| duf2659 family protein | D0Z68_RS01835 | Not Available | Positive | 324586 - 325248 | 25285.7 |
| outer membrane protein assembly factor bamb | D0Z68_RS01840 | Not Available | Positive | 325271 - 326515 | 46422.2 |
| 50s ribosomal protein l13 | D0Z68_RS01845 | Not Available | Positive | 326608 - 327075 | 17406.3 |
| 30s ribosomal protein s9 | D0Z68_RS01850 | Not Available | Positive | 327082 - 327561 | 17952.3 |
| Trna-met | Not Available | Not Available | Positive | 327799 - 327875 | Not Available |
| tetratricopeptide repeat protein | D0Z68_RS09735 | Not Available | Positive | 328054 - 328197 | 5421.27 |
| hypothetical protein | D0Z68_RS01865 | Not Available | Positive | 328308 - 328496 | 7242.02 |
| m15 family metallopeptidase | D0Z68_RS01870 | Not Available | Positive | 328841 - 329002 | 6586.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

