Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:dicarboxylate symporter family transporter | D0Z68_RS01630 | Not Available | Positive | 285616 - 285906 | 10689.4 |
| hypothetical protein | D0Z68_RS01635 | Not Available | Positive | 286006 - 286146 | 5456.93 |
| twin transmembrane helix small protein | D0Z68_RS01640 | Not Available | Positive | 286268 - 286453 | 6889.12 |
| fe-s cluster assembly protein iscx | D0Z68_RS01645 | Not Available | Negative | 286480 - 286695 | 8557.05 |
| peptide deformylase | D0Z68_RS01650 | Not Available | Positive | 286907 - 287434 | 20333.9 |
| methionyl-trna formyltransferase | D0Z68_RS01655 | Not Available | Positive | 287431 - 288342 | 34071.5 |
| hypothetical protein | D0Z68_RS01660 | Not Available | Positive | 288524 - 288940 | 15321.7 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 289190 - 291949 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 292224 - 292338 | Not Available |
| tetratricopeptide repeat protein | D0Z68_RS01680 | Not Available | Positive | 292744 - 293187 | 17307.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

