Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | D0Z68_RS00115 | Not Available | Negative | 15130 - 15657 | 20103.3 |
| metal abc transporter solute-binding protein, zn/mn family | D0Z68_RS00120 | Not Available | Negative | 15645 - 16598 | 36684.5 |
| palindromic element rpe1 domain-containing protein | D0Z68_RS00125 | Not Available | Negative | 16595 - 17905 | 50762.6 |
| tetratricopeptide repeat protein | D0Z68_RS09385 | Not Available | Negative | 18386 - 18593 | 7323.94 |
| tetratricopeptide repeat protein | D0Z68_RS09390 | Not Available | Negative | 18695 - 19424 | 27433.0 |
| tetratricopeptide repeat protein | D0Z68_RS08480 | Not Available | Positive | 20167 - 24282 | 153161.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | D0Z68_RS09695 | Not Available | Positive | 25693 - 26523 | 31262.4 |
| Trna-glu | Not Available | Not Available | Positive | 26637 - 26711 | Not Available |
| hypothetical protein | D0Z68_RS08485 | Not Available | Positive | 26891 - 27208 | 11979.4 |
| hypothetical protein | D0Z68_RS08490 | Not Available | Positive | 27222 - 27380 | 6224.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

