Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbc/virb2 family protein | D0Z68_RS01480 | Not Available | Positive | 258715 - 259074 | 12762.0 |
| mj0042-type zinc finger domain-containing protein | D0Z68_RS01485 | Not Available | Negative | 259510 - 260142 | 24209.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | D0Z68_RS01490 | Not Available | Positive | 260218 - 261042 | 30095.4 |
| hypothetical protein | D0Z68_RS08600 | Not Available | Negative | 261301 - 261468 | 6162.98 |
| hypothetical protein | D0Z68_RS09420 | Not Available | Negative | 262220 - 262489 | 10637.3 |
| penicillin-binding protein 1c | D0Z68_RS01510 | Not Available | Negative | 262876 - 265266 | 90061.0 |
| hypothetical protein | D0Z68_RS01515 | Not Available | Positive | 265829 - 266260 | 15683.9 |
| hypothetical protein | D0Z68_RS08610 | Not Available | Positive | 266278 - 266646 | 13682.2 |
| hypothetical protein | D0Z68_RS01525 | Not Available | Positive | 266653 - 266922 | 9802.14 |
| tetratricopeptide repeat protein | D0Z68_RS09425 | Not Available | Positive | 266934 - 267204 | 9234.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

