Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | D0Z68_RS01250 | Not Available | Negative | 216448 - 218754 | 86971.6 |
| rip metalloprotease rsep | D0Z68_RS01255 | Not Available | Negative | 218994 - 220067 | 39255.9 |
| transcription antitermination factor nusb | D0Z68_RS01260 | Not Available | Positive | 220348 - 220818 | 17779.5 |
| rlme family rna methyltransferase | D0Z68_RS01265 | Not Available | Positive | 220954 - 221637 | 25757.1 |
| hypothetical protein | D0Z68_RS01270 | Not Available | Negative | 221700 - 222761 | 39538.1 |
| hypothetical protein | D0Z68_RS01275 | Not Available | Positive | 222935 - 223879 | 34918.1 |
| type ii toxin-antitoxin system rata family toxin | D0Z68_RS01280 | Not Available | Negative | 223938 - 224378 | 17074.8 |
| duf1674 domain-containing protein | D0Z68_RS01285 | Not Available | Negative | 224378 - 224659 | 10533.2 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | D0Z68_RS01290 | Not Available | Positive | 224672 - 225403 | 27337.3 |
| duf378 domain-containing protein | D0Z68_RS01300 | Not Available | Negative | 225492 - 225728 | 8607.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

