Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| do family serine endopeptidase | D0Z68_RS01040 | Not Available | Positive | 171495 - 173021 | 55563.5 |
| rhodanese domain-containing protein | D0Z68_RS01045 | Not Available | Positive | 173198 - 173941 | 28430.2 |
| succinate dehydrogenase, cytochrome b556 subunit | D0Z68_RS01050 | Not Available | Positive | 174107 - 174481 | 14224.8 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | D0Z68_RS01055 | Not Available | Positive | 174626 - 175003 | 14257.1 |
| succinate dehydrogenase flavoprotein subunit | D0Z68_RS01065 | Not Available | Positive | 175148 - 176938 | 65134.7 |
| amino acid abc transporter permease | D0Z68_RS01070 | Not Available | Positive | 177072 - 177728 | 24523.2 |
| 30s ribosomal protein s12 | D0Z68_RS01075 | Not Available | Positive | 177890 - 178279 | 14291.6 |
| 30s ribosomal protein s7 | D0Z68_RS01080 | Not Available | Positive | 178306 - 178788 | 18443.4 |
| elongation factor g | D0Z68_RS01085 | Not Available | Positive | 178800 - 180899 | 77704.9 |
| Trna-trp | Not Available | Not Available | Positive | 181047 - 181122 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

