Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein | D0Z68_RS00915 | Not Available | Positive | 149127 - 151802 | 99255.7 |
| type iv secretion system protein | D0Z68_RS00920 | Not Available | Positive | 151955 - 155416 | 131739.0 |
| phosphate acetyltransferase | D0Z68_RS00930 | Not Available | Positive | 155986 - 157035 | 38050.6 |
| tetratricopeptide repeat protein | D0Z68_RS00935 | Not Available | Positive | 157077 - 158192 | 41009.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D0Z68_RS00950 | Not Available | Positive | 158757 - 159461 | 26323.8 |
| 50s ribosomal protein l19 | D0Z68_RS00955 | Not Available | Positive | 159479 - 159895 | 15876.4 |
| duf2312 domain-containing protein | D0Z68_RS00965 | Not Available | Negative | 160065 - 160301 | 9029.89 |
| protein translocase subunit secf | D0Z68_RS00970 | Not Available | Positive | 160375 - 161301 | 34988.6 |
| nadh-quinone oxidoreductase subunit nuof | D0Z68_RS00980 | Not Available | Positive | 161466 - 162722 | 45810.3 |
| signal peptidase i | D0Z68_RS00985 | Not Available | Positive | 162914 - 163714 | 31126.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

