Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0Z68_RS07830 | Not Available | Positive | 122084 - 122260 | 6516.97 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | D0Z68_RS00770 | Not Available | Negative | 122364 - 123758 | 53136.8 |
| lysophospholipid acyltransferase family protein | D0Z68_RS00775 | Not Available | Negative | 123755 - 124411 | 24827.8 |
| pyridoxal phosphate-dependent aminotransferase | D0Z68_RS00780 | Not Available | Negative | 124562 - 125767 | 44733.1 |
| txe/yoeb family addiction module toxin | D0Z68_RS00785 | Not Available | Negative | 125827 - 126090 | 10591.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | D0Z68_RS00790 | Not Available | Negative | 126083 - 126334 | 9538.34 |
| methyltransferase domain-containing protein | D0Z68_RS00795 | Not Available | Positive | 126474 - 127478 | 39519.6 |
| vacj family lipoprotein | D0Z68_RS00800 | Not Available | Positive | 127483 - 128238 | 28279.0 |
| phospholipid-binding protein mlac | D0Z68_RS00805 | Not Available | Positive | 128258 - 128857 | 22356.1 |
| ribose-phosphate pyrophosphokinase-like domain-containing protein | D0Z68_RS00815 | Not Available | Positive | 129082 - 129369 | 10754.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

