Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0Z68_RS09345 | Not Available | Positive | 1229680 - 1230198 | 20152.1 |
| bifunctional peptide chain release factor n(5)-glutamine methyltransferase prmc/trna (guanosine(46)-n7)-methyltransferase trmb | D0Z68_RS07455 | Not Available | Positive | 1230332 - 1231906 | 60071.5 |
| l-threonylcarbamoyladenylate synthase | D0Z68_RS07460 | Not Available | Negative | 1231872 - 1232810 | 33752.8 |
| glycine--trna ligase subunit beta | D0Z68_RS07465 | Not Available | Negative | 1232807 - 1234801 | 75612.6 |
| glycine--trna ligase subunit alpha | D0Z68_RS07470 | Not Available | Negative | 1234798 - 1235664 | 33153.8 |
| type ii toxin-antitoxin system vapc family toxin | D0Z68_RS07475 | Not Available | Negative | 1235696 - 1236103 | 15595.1 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | D0Z68_RS07480 | Not Available | Negative | 1236100 - 1236345 | 9432.46 |
| epoxyqueuosine reductase queh | D0Z68_RS07485 | Not Available | Negative | 1236432 - 1237061 | 24824.5 |
| metabolite/h+ symporter | D0Z68_RS07490 | Not Available | Negative | 1237063 - 1238310 | 45405.9 |
| rp853 family protein | D0Z68_RS07495 | Not Available | Negative | 1238545 - 1239495 | 35707.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

