Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D0Z68_RS00705 | Not Available | Positive | 108218 - 109474 | 46245.1 |
| tetratricopeptide repeat protein | D0Z68_RS00715 | Not Available | Positive | 109754 - 109957 | 7657.26 |
| Trna-thr | Not Available | Not Available | Positive | 110047 - 110121 | Not Available |
| preprotein translocase subunit secg | D0Z68_RS00725 | Not Available | Positive | 110307 - 110609 | 10681.4 |
| tetratricopeptide repeat protein | D0Z68_RS00730 | Not Available | Positive | 110941 - 111501 | 20670.9 |
| autotransporter domain-containing protein | D0Z68_RS00735 | Not Available | Negative | 111547 - 116994 | 205642.0 |
| cysteine--trna ligase | D0Z68_RS00740 | Not Available | Positive | 117226 - 118605 | 52944.3 |
| 30s ribosomal protein s2 | D0Z68_RS00745 | Not Available | Positive | 118851 - 119738 | 32942.4 |
| translation elongation factor ts | D0Z68_RS00750 | Not Available | Positive | 119926 - 120855 | 33806.7 |
| hypothetical protein | D0Z68_RS08540 | Not Available | Positive | 121328 - 122062 | 26749.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

