Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase subunit tatc | D0Z68_RS06935 | Not Available | Positive | 1131791 - 1132546 | 29075.1 |
| serine--trna ligase | D0Z68_RS06940 | Not Available | Positive | 1132524 - 1133801 | 48494.3 |
| virb4 family type iv secretion/conjugal transfer atpase | D0Z68_RS06950 | Not Available | Positive | 1134124 - 1136556 | 93309.8 |
| hypothetical protein | D0Z68_RS06955 | Not Available | Positive | 1136691 - 1140179 | 128867.0 |
| terc/alx family metal homeostasis membrane protein | D0Z68_RS06960 | Not Available | Positive | 1140184 - 1141089 | 34722.8 |
| outer membrane protein | D0Z68_RS06965 | Not Available | Positive | 1141129 - 1141842 | 26403.4 |
| methyltransferase regulatory domain-containing protein | D0Z68_RS06970 | Not Available | Positive | 1141921 - 1143585 | 63115.5 |
| type ii toxin-antitoxin system rele/pare family toxin | D0Z68_RS06975 | Not Available | Positive | 1143628 - 1143993 | 14069.4 |
| helix-turn-helix domain-containing protein | D0Z68_RS06980 | Not Available | Positive | 1144087 - 1144344 | 9651.91 |
| nadh-quinone oxidoreductase subunit j | D0Z68_RS06985 | Not Available | Positive | 1144377 - 1144994 | 22958.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

