Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein | D0Z68_RS06820 | Not Available | Negative | 1108987 - 1110027 | 37361.7 |
| lptf/lptg family permease | D0Z68_RS06825 | Not Available | Negative | 1110236 - 1111324 | 41774.7 |
| Trna-met | Not Available | Not Available | Positive | 1111366 - 1111442 | Not Available |
| peptidoglycan-associated lipoprotein pal | D0Z68_RS06835 | Not Available | Negative | 1111751 - 1112218 | 17297.6 |
| palindromic element rpe1 domain-containing protein | D0Z68_RS06840 | Not Available | Positive | 1112439 - 1112708 | 10298.2 |
| beta-ketoacyl-acp synthase iii | D0Z68_RS06845 | Not Available | Negative | 1112698 - 1113651 | 34269.2 |
| 50s ribosomal protein l32 | D0Z68_RS06850 | Not Available | Negative | 1113659 - 1113859 | 7486.14 |
| outer membrane protein assembly factor bame | D0Z68_RS06855 | Not Available | Positive | 1113955 - 1114428 | 18190.9 |
| signal recognition particle-docking protein ftsy | D0Z68_RS06865 | Not Available | Positive | 1114632 - 1115543 | 33253.3 |
| dna polymerase i | D0Z68_RS06875 | Not Available | Positive | 1115706 - 1118333 | 98909.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

