Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0Z68_RS08535 | Not Available | Negative | 98500 - 98712 | 7936.15 |
| porin | D0Z68_RS00655 | Not Available | Negative | 99557 - 100873 | 48060.9 |
| dctp deaminase | D0Z68_RS00660 | Not Available | Positive | 101159 - 101725 | 21342.7 |
| protein-export chaperone secb | D0Z68_RS00665 | Not Available | Positive | 101768 - 102226 | 17169.4 |
| response regulator transcription factor ctra | D0Z68_RS00670 | Not Available | Positive | 102451 - 103164 | 26635.8 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | D0Z68_RS00675 | Not Available | Positive | 103168 - 103989 | 31274.3 |
| cell cycle transcriptional regulator trcr | D0Z68_RS00680 | Not Available | Negative | 104308 - 104868 | 21063.5 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | D0Z68_RS00685 | Not Available | Negative | 104923 - 106320 | 49773.2 |
| ompw family outer membrane protein | D0Z68_RS00695 | Not Available | Negative | 106458 - 107192 | 26587.2 |
| dmt family transporter | D0Z68_RS00700 | Not Available | Positive | 107347 - 108231 | 33129.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

