Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase liga | D0Z68_RS06320 | Not Available | Negative | 1039634 - 1041703 | 77842.2 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | D0Z68_RS09225 | Not Available | Negative | 1041805 - 1041930 | 4678.89 |
| trna guanosine(34) transglycosylase tgt | D0Z68_RS06330 | Not Available | Negative | 1041989 - 1043074 | 40643.0 |
| tetratricopeptide repeat protein | D0Z68_RS09230 | Not Available | Positive | 1043361 - 1043594 | 9059.73 |
| tetratricopeptide repeat protein | D0Z68_RS06340 | Not Available | Positive | 1043724 - 1044402 | 24640.2 |
| tetratricopeptide repeat protein | D0Z68_RS09915 | Not Available | Negative | 1044393 - 1045687 | 47354.2 |
| hypothetical protein | D0Z68_RS06360 | Not Available | Positive | 1046044 - 1046604 | 22159.0 |
| tetratricopeptide repeat protein | D0Z68_RS06365 | Not Available | Negative | 1046697 - 1046891 | 7469.26 |
| tetratricopeptide repeat protein | D0Z68_RS09645 | Not Available | Negative | 1046900 - 1047185 | 9923.7 |
| outer membrane lipid asymmetry maintenance protein mlad | D0Z68_RS06375 | Not Available | Negative | 1047349 - 1047798 | 15919.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

