Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-8-phosphooctulonate synthase | D0Z68_RS00595 | Not Available | Positive | 88892 - 89716 | 30033.8 |
| hypothetical protein | D0Z68_RS00600 | Not Available | Positive | 90411 - 90761 | 13575.6 |
| hypothetical protein | D0Z68_RS09700 | Not Available | Positive | 90736 - 90942 | 7798.09 |
| hypothetical protein | D0Z68_RS00610 | Not Available | Positive | 90991 - 91218 | 8296.99 |
| iron-sulfur cluster assembly accessory protein | D0Z68_RS00615 | Not Available | Negative | 91502 - 91834 | 12301.7 |
| deoxyguanosinetriphosphate triphosphohydrolase | D0Z68_RS00625 | Not Available | Positive | 92066 - 93220 | 44228.5 |
| tetratricopeptide repeat protein | D0Z68_RS09705 | Not Available | Negative | 93134 - 93325 | 6986.32 |
| arginine--trna ligase | D0Z68_RS00635 | Not Available | Positive | 93370 - 95100 | 65235.6 |
| spor domain-containing protein | D0Z68_RS00640 | Not Available | Positive | 95273 - 95947 | 25383.7 |
| dna topoisomerase iv subunit a | D0Z68_RS00645 | Not Available | Positive | 96138 - 98351 | 83120.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

