Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpn family recombination-promoting nuclease/putative transposase | D0Z68_RS06080 | Not Available | Positive | 994382 - 995377 | 38641.4 |
| valine--trna ligase | D0Z68_RS06085 | Not Available | Positive | 995415 - 997853 | 94320.1 |
| licd family protein | D0Z68_RS06090 | Not Available | Positive | 997822 - 998574 | 29369.6 |
| licd family protein | D0Z68_RS06095 | Not Available | Positive | 998623 - 999459 | 32997.4 |
| atp-binding protein | D0Z68_RS06100 | Not Available | Negative | 999556 - 1000761 | 46701.1 |
| dna recombination protein rmuc | D0Z68_RS06105 | Not Available | Positive | 1001211 - 1002497 | 48173.4 |
| alpha-1,3-fucosyltransferase | D0Z68_RS09205 | Not Available | Positive | 1002628 - 1002915 | 11189.5 |
| hypothetical protein | D0Z68_RS09210 | Not Available | Positive | 1002902 - 1003135 | 9041.64 |
| glycosyltransferase family 10 domain-containing protein | D0Z68_RS08145 | Not Available | Positive | 1003157 - 1003267 | 4240.28 |
| tetratricopeptide repeat protein | D0Z68_RS06115 | Not Available | Positive | 1003510 - 1004154 | 24846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

