Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | strain LA4/2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Ixodida, Haemaphysalis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
435277 bp
Thymine Count
432827 bp
Guanine Count
209781 bp
Cytosine Count
205369 bp
Genome Length
1283254 bp
Protein-coding Genes
1439 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l22 | D0Z68_RS05775 | Not Available | Negative | 949435 - 949794 | 13266.4 |
| 30s ribosomal protein s19 | D0Z68_RS05780 | Not Available | Negative | 949803 - 950081 | 10469.9 |
| 50s ribosomal protein l2 | D0Z68_RS05785 | Not Available | Negative | 950106 - 950927 | 30167.7 |
| 50s ribosomal protein l23 | D0Z68_RS05790 | Not Available | Negative | 950929 - 951225 | 11399.2 |
| 50s ribosomal protein l4 | D0Z68_RS05795 | Not Available | Negative | 951222 - 951845 | 22962.1 |
| 50s ribosomal protein l3 | D0Z68_RS05800 | Not Available | Negative | 951955 - 952602 | 23689.1 |
| 30s ribosomal protein s10 | D0Z68_RS05805 | Not Available | Negative | 952603 - 952920 | 11787.5 |
| tetratricopeptide repeat protein | D0Z68_RS05810 | Not Available | Negative | 952938 - 953116 | 7093.55 |
| elongation factor tu | D0Z68_RS05815 | Not Available | Negative | 953161 - 954345 | 42880.7 |
| Trna-gly | Not Available | Not Available | Positive | 954437 - 954510 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Japanese spotted fever | Causes | PMC6200003 |
| Japanese spotted fever | Causes | PMC6711240 |

