Aquimarina sp. BL5

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina sp. BL5 is a Gram-negative, rod-shaped bacterium. It is characterized by having a single replicon, which indicates a streamlined genetic structure. The organism is cataloged under the accession number NZ_CP031963.1, allowing for its identification and further study within genomic databases. As a member of the genus Aquimarina, this bacterium shares traits commonly associated with marine environments. Members of this genus are typically found in oceanic waters, where they may play a role in nutrient cycling and contribute to the microbial diversity of marine ecosystems. The rod shape of Aquimarina sp. BL5 may confer advantages in mobility and nutrient uptake in its aquatic habitat. The presence of a single replicon in Aquimarina sp. BL5 suggests a potential adaptation to its environment, possibly allowing for efficient replication and resource utilization in the competitive marine microbiome. Understanding the specific ecological roles and interactions of Aquimarina sp. BL5 could enhance our knowledge of microbial processes in marine ecosystems, particularly regarding their contributions to biogeochemical cycles and their interactions with other marine organisms. This insight emphasizes the importance of studying such microorganisms to comprehend their ecological significance and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina sp. BL5
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina sp. BL5 chromosome, complete genome.

Gene Summary

Adenine Count

2027485 bp

Thymine Count

2003369 bp

Guanine Count

997316 bp

Cytosine Count

983067 bp

Genome Length

6011237 bp

Protein-coding Genes

4987 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-dehydro-4-deoxy-d-glucuronate isomeraseD1818_RS12380Not AvailablePositive2883795 - 288463431624.6
gluconate 5-dehydrogenaseD1818_RS12385Not AvailablePositive2884643 - 288543728239.3
duf4861 domain-containing proteinD1818_RS12390Not AvailablePositive2885437 - 288668147006.2
hypothetical proteinD1818_RS12395Not AvailablePositive2886683 - 28869469601.48
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseD1818_RS12400Not AvailablePositive2886972 - 288763724746.1
trap transporter substrate-binding proteinD1818_RS12405Not AvailablePositive2887642 - 288862236802.6
trap transporter small permeaseD1818_RS12410Not AvailablePositive2888619 - 288908017326.1
trap transporter large permeaseD1818_RS12415Not AvailablePositive2889091 - 289038646105.0
carbohydrate-binding proteinD1818_RS12420Not AvailableNegative2890578 - 2895173168734.0
ig-like domain-containing proteinD1818_RS12425Not AvailableNegative2895943 - 289814181517.1

Displaying genes 2501 – 2510 of 5069 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.